CAP Fish HLIs Query Functions

Function for returning HLI tables. This is the main user function.

rcax_hli()

Return fish HLI tables from Coordinated Assessments data eXchange

Internal data

There are a few internal data sets that may be useful. These are accessed by the data name with rCAX:::

caxesu

ESU/DPS names

caxtabs

CAX API table names and table_id

cax_column_definitions

Column names and definitions

Package Information

rCAX-package rCAX

rCAX

rcax_version()

Look up the rCAX versions

rcax_citation()

Get the citation CAX version

rcax_termsofuse()

Get CAX HLI data Terms of Use

Additional API tables

Additional tables (not HLI) available in the CAX API.

rcax_escdata()

Get EscData table

rcax_superpops()

Get SuperPopulations table

rcax_datasets()

Get the list of CAX datasets (tables) with ids

Connecting to API

Functions for connecting to the API. These are for internal and developers use.

rcax_table_query()

Return tables by table name from Coordinated Assessments data eXchange

rcax_GET()

Make a GET call to API

rcax_base()

Set the base API url

rcax_ua()

Make the user agent string

check_key()

Get the key from the user system environment variable

rcax_parse()

Parse results from API call

rcax_filter()

Create filter to add to GET call

rcax_table_name()

Return table name given the HLI short name

rcax_table_cols()

Returns the colnames to use for tables

rcax_table_sortcols()

Returns the default sort columns for tables

internal_data

Internal data used by functions